Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06509.1Hypothetical protein. (56 aa)    
Predicted Functional Partners:
EAQ06510.1
COG3825 Uncharacterized protein conserved in bacteria.
       0.853
EAQ06508.1
Hypothetical protein.
       0.811
EAQ06700.1
MobC protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.746
EAQ08065.1
Cobaltochelatase.
  
     0.693
EAQ06784.1
Hypothetical protein.
  
     0.692
EAQ06507.1
ATPase, AAA family; COG0714 MoxR-like ATPases.
       0.662
EAQ06212.1
Hypothetical protein.
  
     0.650
EAQ05271.1
Autoinducer synthesis protein; COG3916 N-acyl-L-homoserine lactone synthetase.
  
     0.641
EAQ06640.1
Hypothetical protein.
  
     0.627
EAQ08213.1
Hypothetical protein.
  
     0.622
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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