close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06511.1Peptidase, M48 family; COG0501 Zn-dependent protease with chaperone function. (228 aa)    
Predicted Functional Partners:
ribB
Bifunctional GTP cyclohydrolaseII/3,4-dihydroxy-2butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.775
EAQ06510.1
COG3825 Uncharacterized protein conserved in bacteria.
       0.679
EAQ06674.1
Hypothetical protein; COG4942 Membrane-bound metallopeptidase.
   
   0.668
EAQ06508.1
Hypothetical protein.
 
     0.659
EAQ06922.1
Hypothetical protein.
  
     0.618
EAQ06517.1
COG0840 Methyl-accepting chemotaxis protein.
    
  0.617
EAQ06858.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
    
  0.617
EAQ06509.1
Hypothetical protein.
       0.615
EAQ05930.1
Hypothetical protein.
  
     0.599
EAQ06206.1
COG0236 Acyl carrier protein.
  
     0.586
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.