Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05233.1COG1045 Serine acetyltransferase. (286 aa)    
Predicted Functional Partners:
EAQ05459.1
COG0031 Cysteine synthase.
 
 0.995
cysS
COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.972
EAQ08105.1
COG0560 Phosphoserine phosphatase.
    
 0.921
EAQ05620.1
Protein-tyrosine kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
 
 0.886
EAQ06438.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
 
 0.886
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 
 
 0.874
EAQ08104.1
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
 
 
 0.868
EAQ05236.1
Hypothetical protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
       0.853
EAQ05237.1
Hypothetical protein.
       0.853
EAQ05238.1
Hypothetical protein.
       0.853
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.