Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05239.1COG5281 Phage-related minor tail protein. (221 aa)    
Predicted Functional Partners:
EAQ05245.1
Hypothetical protein.
 
 
   0.985
EAQ05236.1
Hypothetical protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
 
   0.977
EAQ05241.1
Hypothetical protein.
 
    0.971
EAQ05238.1
Hypothetical protein.
 
    0.970
EAQ05242.1
Major tail protein, TP901-1 family; COG5437 Predicted secreted protein.
 
     0.965
EAQ05237.1
Hypothetical protein.
 
     0.964
EAQ05243.1
Hypothetical protein.
 
    0.958
EAQ05244.1
COG5614 Bacteriophage head-tail adaptor.
 
     0.954
EAQ05240.1
Hypothetical protein.
 
     0.950
EAQ06435.1
COG1652 Uncharacterized protein containing LysM domain.
  
   0.948
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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