STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05248.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
EAQ05249.1
Putative portal protein; COG4695 Phage-related protein.
       0.799
EAQ05247.1
Phage prohead protease, HK97 family; COG3740 Phage head maturation protease.
       0.520
EAQ05246.1
Major capsid protein, HK97 family; COG4653 Predicted phage phi-C31 gp36 major capsid-like protein.
       0.439
EAQ05250.1
Putative large terminase.
       0.421
EAQ05251.1
Hypothetical protein.
       0.421
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.