rplI protein (Yoonia vestfoldensis SKA53) - STRING interaction network

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Score

rplI

50S ribosomal protein L9; Binds to the 23S rRNA. (193 aa)

Predicted Functional Partners:

rpsF

0.998

rpsR

0.998

rpoC

0.997

rplY

0.994

rplU

0.993

rplT

0.993

rplL

0.993

rplQ

0.993

rplS

0.993

rpsD

0.992

Your Current Organism:

Yoonia vestfoldensis SKA53

NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplI	rplL	SKA53_05785	SKA53_13268	50S ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	0.993
rplI	rplQ	SKA53_05785	SKA53_13466	50S ribosomal protein L9; Binds to the 23S rRNA.	COG0203 Ribosomal protein L17.	0.993
rplI	rplS	SKA53_05785	SKA53_14971	50S ribosomal protein L9; Binds to the 23S rRNA.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.993
rplI	rplT	SKA53_05785	SKA53_10219	50S ribosomal protein L9; Binds to the 23S rRNA.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.993
rplI	rplU	SKA53_05785	SKA53_04353	50S ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.993
rplI	rplY	SKA53_05785	SKA53_01246	50S ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	0.994
rplI	rpoC	SKA53_05785	SKA53_13278	50S ribosomal protein L9; Binds to the 23S rRNA.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
rplI	rpsD	SKA53_05785	SKA53_09654	50S ribosomal protein L9; Binds to the 23S rRNA.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.992
rplI	rpsF	SKA53_05785	SKA53_05775	50S ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.998
rplI	rpsR	SKA53_05785	SKA53_05780	50S ribosomal protein L9; Binds to the 23S rRNA.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.998
rplL	rplI	SKA53_13268	SKA53_05785	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	50S ribosomal protein L9; Binds to the 23S rRNA.	0.993
rplL	rplQ	SKA53_13268	SKA53_13466	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	COG0203 Ribosomal protein L17.	0.995
rplL	rplS	SKA53_13268	SKA53_14971	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.994
rplL	rplT	SKA53_13268	SKA53_10219	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.994
rplL	rplU	SKA53_13268	SKA53_04353	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.994
rplL	rplY	SKA53_13268	SKA53_01246	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	Ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	0.989
rplL	rpoC	SKA53_13268	SKA53_13278	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rplL	rpsD	SKA53_13268	SKA53_09654	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.992
rplL	rpsF	SKA53_13268	SKA53_05775	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.990
rplL	rpsR	SKA53_13268	SKA53_05780	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.990