STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05271.1Autoinducer synthesis protein; COG3916 N-acyl-L-homoserine lactone synthetase. (212 aa)    
Predicted Functional Partners:
EAQ05272.1
Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins.
 
 
 0.960
EAQ05273.1
Possible transcriptional activator; COG2771 DNA-binding HTH domain-containing proteins.
 
 
 0.942
EAQ06798.1
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
  
  
  0.782
EAQ07462.1
Sensory box-containing diguanylate cyclase, putative; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
    
  0.766
EAQ07807.1
Hypothetical protein; COG2199 FOG: GGDEF domain.
    
  0.766
EAQ06371.1
Hypothetical protein; COG0496 Predicted acid phosphatase.
  
     0.711
EAQ08130.1
Hypothetical protein; COG2183 Transcriptional accessory protein.
  
  
 0.706
EAQ07166.1
Possible flagellar switch protein FliM; COG0477 Permeases of the major facilitator superfamily.
  
     0.692
EAQ06975.1
Transcriptional regulator, LuxR family; COG2771 DNA-binding HTH domain-containing proteins.
  
 
 0.681
EAQ05761.1
Hypothetical protein; COG2771 DNA-binding HTH domain-containing proteins.
  
 
 0.681
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.