STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05291.1Hypothetical protein. (235 aa)    
Predicted Functional Partners:
EAQ05290.1
Putative quinoprotein; COG1520 FOG: WD40-like repeat.
 
     0.833
der
GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
       0.715
EAQ07641.1
Hypothetical protein.
  
     0.645
EAQ07919.1
Hypothetical protein.
  
     0.594
EAQ06667.1
Hypothetical protein.
  
     0.588
EAQ06486.1
Hypothetical protein; COG1279 Lysine efflux permease.
  
    0.570
EAQ06807.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
  
     0.542
EAQ07962.1
Membrane protein, putative.
  
     0.532
EAQ07245.1
CvpA family protein; COG1286 Uncharacterized membrane protein, required for colicin V production.
 
     0.511
yidC
Putative inner membrane protein translocase component YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
   
    0.504
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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