Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ05295.1 | EAQ05296.1 | SKA53_05950 | SKA53_05955 | ABC transporter, ATP-binding/permease protein; COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components. | Possible peptidoglycan binding protein; COG1652 Uncharacterized protein containing LysM domain. | 0.736 |
| EAQ05295.1 | EAQ05297.1 | SKA53_05950 | SKA53_05960 | ABC transporter, ATP-binding/permease protein; COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components. | Hypothetical protein; COG1611 Predicted Rossmann fold nucleotide-binding protein; Belongs to the LOG family. | 0.572 |
| EAQ05296.1 | EAQ05295.1 | SKA53_05955 | SKA53_05950 | Possible peptidoglycan binding protein; COG1652 Uncharacterized protein containing LysM domain. | ABC transporter, ATP-binding/permease protein; COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components. | 0.736 |
| EAQ05296.1 | EAQ05297.1 | SKA53_05955 | SKA53_05960 | Possible peptidoglycan binding protein; COG1652 Uncharacterized protein containing LysM domain. | Hypothetical protein; COG1611 Predicted Rossmann fold nucleotide-binding protein; Belongs to the LOG family. | 0.740 |
| EAQ05297.1 | EAQ05295.1 | SKA53_05960 | SKA53_05950 | Hypothetical protein; COG1611 Predicted Rossmann fold nucleotide-binding protein; Belongs to the LOG family. | ABC transporter, ATP-binding/permease protein; COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components. | 0.572 |
| EAQ05297.1 | EAQ05296.1 | SKA53_05960 | SKA53_05955 | Hypothetical protein; COG1611 Predicted Rossmann fold nucleotide-binding protein; Belongs to the LOG family. | Possible peptidoglycan binding protein; COG1652 Uncharacterized protein containing LysM domain. | 0.740 |
| EAQ05297.1 | apt | SKA53_05960 | SKA53_08371 | Hypothetical protein; COG1611 Predicted Rossmann fold nucleotide-binding protein; Belongs to the LOG family. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.465 |
| EAQ05297.1 | prmC | SKA53_05960 | SKA53_05283 | Hypothetical protein; COG1611 Predicted Rossmann fold nucleotide-binding protein; Belongs to the LOG family. | Modification methylase, HemK family; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.653 |
| apt | EAQ05297.1 | SKA53_08371 | SKA53_05960 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypothetical protein; COG1611 Predicted Rossmann fold nucleotide-binding protein; Belongs to the LOG family. | 0.465 |
| prmC | EAQ05297.1 | SKA53_05283 | SKA53_05960 | Modification methylase, HemK family; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | Hypothetical protein; COG1611 Predicted Rossmann fold nucleotide-binding protein; Belongs to the LOG family. | 0.653 |