Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ05301.1Sarcosine oxidase, alpha subunit family; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family. (1002 aa)    
Predicted Functional Partners:
EAQ05300.1
COG4583 Sarcosine oxidase gamma subunit.
 
 0.997
EAQ05302.1
COG4311 Sarcosine oxidase delta subunit.
 
 0.997
EAQ05303.1
Sarcosine oxidase, beta subunit family; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
 0.991
EAQ07113.1
COG4311 Sarcosine oxidase delta subunit.
 
 0.990
EAQ08236.1
Hypothetical protein; COG4311 Sarcosine oxidase delta subunit.
 0.990
EAQ07115.1
COG4583 Sarcosine oxidase gamma subunit.
 
 0.966
EAQ07112.1
Sarcosine oxidase, beta subunit family; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
 0.963
EAQ08237.1
Hypothetical protein; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
 0.963
EAQ08234.1
COG4583 Sarcosine oxidase gamma subunit.
  
 0.958
EAQ06947.1
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.955
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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