Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ05302.1COG4311 Sarcosine oxidase delta subunit. (129 aa)    
Predicted Functional Partners:
EAQ05300.1
COG4583 Sarcosine oxidase gamma subunit.
 
 0.997
EAQ05301.1
Sarcosine oxidase, alpha subunit family; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
 
 0.997
EAQ07114.1
Sarcosine oxidase, alpha subunit family; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
 
 0.987
EAQ08235.1
Sarcosine oxidase, alpha subunit; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
 
 0.987
EAQ05303.1
Sarcosine oxidase, beta subunit family; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
  0.976
EAQ08234.1
COG4583 Sarcosine oxidase gamma subunit.
  
 0.952
EAQ06829.1
Aminomethyl transferase family protein; COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
 
 0.943
EAQ07115.1
COG4583 Sarcosine oxidase gamma subunit.
 
  0.933
EAQ08082.1
Aminomethyl transferase family protein; COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
 
 0.920
EAQ08080.1
FAD dependent oxidoreductase/aminomethyl transferase; COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
 
 0.919
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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