Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ05677.1 | EAQ05680.1 | SKA53_06222 | SKA53_06237 | COG0546 Predicted phosphatases. | Hypothetical protein. | 0.645 |
| EAQ05677.1 | glmS | SKA53_06222 | SKA53_06232 | COG0546 Predicted phosphatases. | D-fructose-6-phosphate amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.692 |
| EAQ05677.1 | glmU | SKA53_06222 | SKA53_06227 | COG0546 Predicted phosphatases. | UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.702 |
| EAQ05680.1 | EAQ05677.1 | SKA53_06237 | SKA53_06222 | Hypothetical protein. | COG0546 Predicted phosphatases. | 0.645 |
| EAQ05680.1 | EAQ05922.1 | SKA53_06237 | SKA53_07451 | Hypothetical protein. | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | 0.502 |
| EAQ05680.1 | EAQ06458.1 | SKA53_06237 | SKA53_05203 | Hypothetical protein. | TfoX domain protein; COG3070 Regulator of competence-specific genes. | 0.502 |
| EAQ05680.1 | EAQ06595.1 | SKA53_06237 | SKA53_13646 | Hypothetical protein. | Putative methyltransferase protein; COG5598 Trimethylamine:corrinoid methyltransferase; Belongs to the trimethylamine methyltransferase family. | 0.450 |
| EAQ05680.1 | EAQ07247.1 | SKA53_06237 | SKA53_02586 | Hypothetical protein. | Hypothetical protein; COG2995 Uncharacterized paraquat-inducible protein A. | 0.461 |
| EAQ05680.1 | EAQ07477.1 | SKA53_06237 | SKA53_11608 | Hypothetical protein. | ABC transporter, permease protein; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component. | 0.417 |
| EAQ05680.1 | glmS | SKA53_06237 | SKA53_06232 | Hypothetical protein. | D-fructose-6-phosphate amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.855 |
| EAQ05680.1 | glmU | SKA53_06237 | SKA53_06227 | Hypothetical protein. | UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.855 |
| EAQ05922.1 | EAQ05680.1 | SKA53_07451 | SKA53_06237 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Hypothetical protein. | 0.502 |
| EAQ06458.1 | EAQ05680.1 | SKA53_05203 | SKA53_06237 | TfoX domain protein; COG3070 Regulator of competence-specific genes. | Hypothetical protein. | 0.502 |
| EAQ06595.1 | EAQ05680.1 | SKA53_13646 | SKA53_06237 | Putative methyltransferase protein; COG5598 Trimethylamine:corrinoid methyltransferase; Belongs to the trimethylamine methyltransferase family. | Hypothetical protein. | 0.450 |
| EAQ07247.1 | EAQ05680.1 | SKA53_02586 | SKA53_06237 | Hypothetical protein; COG2995 Uncharacterized paraquat-inducible protein A. | Hypothetical protein. | 0.461 |
| EAQ07477.1 | EAQ05680.1 | SKA53_11608 | SKA53_06237 | ABC transporter, permease protein; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component. | Hypothetical protein. | 0.417 |
| glmS | EAQ05677.1 | SKA53_06232 | SKA53_06222 | D-fructose-6-phosphate amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | COG0546 Predicted phosphatases. | 0.692 |
| glmS | EAQ05680.1 | SKA53_06232 | SKA53_06237 | D-fructose-6-phosphate amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Hypothetical protein. | 0.855 |
| glmS | glmU | SKA53_06232 | SKA53_06227 | D-fructose-6-phosphate amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.989 |
| glmU | EAQ05677.1 | SKA53_06227 | SKA53_06222 | UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | COG0546 Predicted phosphatases. | 0.702 |
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