Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ05694.1Putative ribonuclease protein; COG1295 Predicted membrane protein. (101 aa)    
Predicted Functional Partners:
EAQ05695.1
Hypothetical protein.
       0.554
EAQ05791.1
Transcriptional regulator/arsenate reductase; COG0640 Predicted transcriptional regulators; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.507
EAQ05609.1
Hypothetical protein; COG1834 N-Dimethylarginine dimethylaminohydrolase.
   
    0.497
EAQ08212.1
Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1.
  
  
 0.476
EAQ05696.1
Hypothetical protein.
       0.457
EAQ05512.1
COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
 
   
 0.425
EAQ07590.1
COG2857 Cytochrome c1.
      
 0.406
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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