STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05712.1COG0848 Biopolymer transport protein. (128 aa)    
Predicted Functional Partners:
EAQ05711.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
 
 
 0.995
EAQ05714.1
MotA/TolQ/ExbB proton channel family protein; COG0811 Biopolymer transport proteins.
 
 
 0.994
EAQ05713.1
Hypothetical protein.
 
     0.965
EAQ05715.1
Hypothetical protein.
 
     0.965
EAQ05716.1
Putative Hemin receptor protein HmuR; COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.958
EAQ06147.1
tonB domain protein, putative.
  
 
 0.893
hmuV
ATP-binding protein of ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
   
 0.886
tolQ
Proton transporter TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.876
EAQ05718.1
Putative hemin binding periplasmic transmembrane protein; COG4558 ABC-type hemin transport system, periplasmic component.
 
  
 0.867
EAQ05717.1
Hemin degrading factor; COG3720 putative heme degradation protein.
 
   
 0.862
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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