Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05715.1Hypothetical protein. (135 aa)    
Predicted Functional Partners:
EAQ05711.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
 
     0.965
EAQ05712.1
COG0848 Biopolymer transport protein.
 
     0.965
EAQ05713.1
Hypothetical protein.
 
     0.964
EAQ05714.1
MotA/TolQ/ExbB proton channel family protein; COG0811 Biopolymer transport proteins.
 
     0.962
EAQ05716.1
Putative Hemin receptor protein HmuR; COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.954
hmuV
ATP-binding protein of ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
     0.889
EAQ05717.1
Hemin degrading factor; COG3720 putative heme degradation protein.
 
     0.870
EAQ05718.1
Putative hemin binding periplasmic transmembrane protein; COG4558 ABC-type hemin transport system, periplasmic component.
 
     0.851
EAQ05719.1
Permease protein of ABC transporter; COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.745
EAQ05710.1
Putative binding-protein-dependent transport protein (periplasmic); COG0747 ABC-type dipeptide transport system, periplasmic component.
       0.428
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.