Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ05742.1ABC polyamine/opine transporter, inner membrane subunit; COG1177 ABC-type spermidine/putrescine transport system, permease component II. (295 aa)    
Predicted Functional Partners:
EAQ05741.1
Polyamine ABC transporter, permease protein; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
  0.999
EAQ05740.1
COG0687 Spermidine/putrescine-binding periplasmic protein.
 
  0.990
EAQ06314.1
ABC spermidine/putrescine transporter, inner membrane subunit; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
0.981
EAQ05340.1
COG0687 Spermidine/putrescine-binding periplasmic protein.
 
  0.980
EAQ05334.1
ABC transporter permease protein; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
0.972
potA
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  0.967
EAQ08242.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
  0.950
EAQ08243.1
Probable binding protein component of ABC transporter; COG0687 Spermidine/putrescine-binding periplasmic protein.
 
  0.927
EAQ05335.1
Spermidine/putrescine ABC transporter, ATP-binding protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
  0.926
EAQ05451.1
ABC polyamine transporter, periplasmic substrate-binding protein; COG0687 Spermidine/putrescine-binding periplasmic protein.
 
  0.922
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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