Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ05792.1Hypothetical protein; COG3218 ABC-type uncharacterized transport system, auxiliary component. (189 aa)    
Predicted Functional Partners:
EAQ05793.1
Putative ABC transporter, periplasmic substrate-binding protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
  0.991
EAQ05795.1
ABC transporter, inner membrane subunit; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
 
 
 0.983
EAQ05794.1
ABC transporter, ATPase subunit; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
 
 
  0.977
EAQ06442.1
Hypothetical protein; COG2252 Permeases.
  
  0.815
EAQ05790.1
Glyceraldehyde-3-phosphate dehydrogenase, type I; COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
       0.561
EAQ05791.1
Transcriptional regulator/arsenate reductase; COG0640 Predicted transcriptional regulators; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.561
EAQ05789.1
Membrane protein, putative; COG0477 Permeases of the major facilitator superfamily.
       0.533
EAQ07423.1
Flagellar biosynthesis protein, FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.529
EAQ07448.1
COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.529
EAQ07288.1
COG1664 Integral membrane protein CcmA involved in cell shape determination.
   
    0.528
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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