Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ05795.1ABC transporter, inner membrane subunit; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component. (380 aa)    
Predicted Functional Partners:
EAQ05793.1
Putative ABC transporter, periplasmic substrate-binding protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 0.999
EAQ05794.1
ABC transporter, ATPase subunit; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
 
 0.999
EAQ06442.1
Hypothetical protein; COG2252 Permeases.
  
 0.995
EAQ05792.1
Hypothetical protein; COG3218 ABC-type uncharacterized transport system, auxiliary component.
 
 
 0.983
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
 
 0.979
EAQ07893.1
Hypothetical protein; COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
   
 0.868
EAQ06630.1
COG2199 FOG: GGDEF domain.
 
 
  0.868
EAQ05977.1
Hypothetical protein; COG2199 FOG: GGDEF domain.
 
 
  0.867
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
    0.855
EAQ07449.1
Flagellar proximal rod protein FlgB; COG1815 Flagellar basal body protein.
  
    0.839
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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