Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ05798.1Hypothetical protein; COG3568 Metal-dependent hydrolase. (257 aa)    
Predicted Functional Partners:
EAQ05799.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
 
     0.744
EAQ05455.1
Aminotransferase, class V; COG0520 Selenocysteine lyase.
    
   0.694
EAQ06447.1
Cysteine desulfurase SufS; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.694
EAQ05797.1
Hypothetical protein; COG2319 FOG: WD40 repeat.
 
     0.649
EAQ05208.1
Hypothetical protein; COG0366 Glycosidases.
  
 
  0.477
EAQ07245.1
CvpA family protein; COG1286 Uncharacterized membrane protein, required for colicin V production.
   
    0.462
EAQ05697.1
Hypothetical protein; COG0392 Predicted integral membrane protein.
  
  
 0.418
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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