STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05809.1Hypothetical protein; COG2188 Transcriptional regulators. (235 aa)    
Predicted Functional Partners:
EAQ05808.1
Putative oxidoreductase protein; COG0673 Predicted dehydrogenases and related proteins.
 
    0.961
EAQ05810.1
Hypothetical protein; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
 
     0.921
EAQ05811.1
Hypothetical protein; COG4989 Predicted oxidoreductase.
 
    0.913
EAQ05813.1
Hypothetical protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.842
EAQ05815.1
TRAP dicarboxylate transporter, DctP subunit; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
     0.773
EAQ05812.1
COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
 
     0.719
EAQ08084.1
DNA-binding protein, putative; COG1396 Predicted transcriptional regulators.
  
  
 0.544
EAQ05814.1
Probable ABC transporter permease protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
     0.535
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.511
EAQ05397.1
Hypothetical protein; COG1820 N-acetylglucosamine-6-phosphate deacetylase.
  
  
 0.455
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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