Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05825.1Xylose operon repressor; COG1940 Transcriptional regulator/sugar kinase. (421 aa)    
Predicted Functional Partners:
EAQ05826.1
FG-GAP repeat domain protein.
 
     0.954
EAQ06093.1
COG0381 UDP-N-acetylglucosamine 2-epimerase.
 
   
 0.942
EAQ07715.1
Mannose-6-phosphate isomerase /; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.896
xylA
COG2115 Xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.869
EAQ05824.1
ABC sugar (xylose) transporter, periplasmic binding protein; COG4213 ABC-type xylose transport system, periplasmic component.
 
     0.849
EAQ05397.1
Hypothetical protein; COG1820 N-acetylglucosamine-6-phosphate deacetylase.
 
 
 0.817
pgi
COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.765
glmS
D-fructose-6-phosphate amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 
 0.751
EAQ07552.1
Hypothetical protein; COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases.
    
  0.749
EAQ07103.1
Fructose-1,6-bisphosphatase, class II; COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins.
     
 0.747
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.