STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05827.1Methylamine utilization protein MauG, putative; COG1858 Cytochrome c peroxidase. (437 aa)    
Predicted Functional Partners:
EAQ08005.1
COG3544 Uncharacterized protein conserved in bacteria.
  
 
 0.841
EAQ05826.1
FG-GAP repeat domain protein.
  
   
 0.795
EAQ05825.1
Xylose operon repressor; COG1940 Transcriptional regulator/sugar kinase.
  
    0.645
EAQ05824.1
ABC sugar (xylose) transporter, periplasmic binding protein; COG4213 ABC-type xylose transport system, periplasmic component.
  
     0.598
EAQ05828.1
Hypothetical protein.
       0.596
EAQ05822.1
COG1129 ABC-type sugar transport system, ATPase component.
  
     0.520
EAQ05447.1
Coproporphyrinogen III oxidase, oxygen-independent (HemN); COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
   
    0.460
EAQ05823.1
COG4214 ABC-type xylose transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
     0.459
EAQ07665.1
Thiol-specific antioxidant protein; COG0450 Peroxiredoxin.
     
 0.428
EAQ05829.1
RNA pseudouridine synthase family protein; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family.
       0.418
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.