STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05836.1Transcriptional regulator, GntR family; COG1802 Transcriptional regulators. (217 aa)    
Predicted Functional Partners:
EAQ05338.1
Putative transcriptional regulator, GntR family protein; COG1802 Transcriptional regulators.
  
     0.769
EAQ06765.1
Transcriptional regulator, GntR family; COG1802 Transcriptional regulators.
  
     0.768
EAQ06877.1
Pyruvate dehydrogenase complex repressor; COG2186 Transcriptional regulators.
  
  
 0.561
EAQ05837.1
Pyrimidine 5'-nucleotidase; COG1011 Predicted hydrolase (HAD superfamily).
       0.545
EAQ06531.1
COG0440 Acetolactate synthase, small (regulatory) subunit.
  
    0.535
EAQ05838.1
COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
       0.462
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.