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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05850.1Hypothetical protein. (173 aa)    
Predicted Functional Partners:
glyQ
COG0752 Glycyl-tRNA synthetase, alpha subunit.
  
  0.999
glyS
COG0751 Glycyl-tRNA synthetase, beta subunit.
      0.943
EAQ07795.1
Hypothetical protein.
  
     0.755
EAQ05930.1
Hypothetical protein.
  
     0.748
EAQ06660.1
Hypothetical protein; COG2217 Cation transport ATPase.
  
     0.745
EAQ05832.1
COG5488 Integral membrane protein.
  
     0.740
EAQ07963.1
Hypothetical protein; COG1335 Amidases related to nicotinamidase.
  
     0.726
EAQ05891.1
Hypothetical protein; COG5462 Predicted secreted (periplasmic) protein.
  
     0.714
EAQ06716.1
OmpA domain protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
     0.712
leuS
COG0495 Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.702
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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