STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05853.1DNA photolyase-like protein; COG0415 Deoxyribodipyrimidine photolyase. (400 aa)    
Predicted Functional Partners:
EAQ07849.1
COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase.
 
   
 0.659
EAQ07581.1
COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog).
 
  
 0.613
EAQ05457.1
Cyclopropane-fatty-acyl-phospholipid synthase CfaS; COG2230 Cyclopropane fatty acid synthase and related methyltransferases.
 
   
 0.600
EAQ05852.1
Trk system potassium uptake protein TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.
       0.565
EAQ08121.1
Beta-Ig-H3/Fasciclin; COG2335 Secreted and surface protein containing fasciclin-like repeats.
 
  
 0.538
EAQ05855.1
Isoquinoline 1-oxidoreductase, beta subunit, putative; COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs.
  
    0.526
EAQ06590.1
Probable deoxyribodipyrimidine photolyase; COG3380 Predicted NAD/FAD-dependent oxidoreductase.
 
     0.523
EAQ05854.1
Isoquinoline 1-oxidoreductase, alpha subunit; COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
       0.519
EAQ07684.1
Putative cyclopropane/cyclopropene fatty acid synthesis protein, flavin amine oxidase; COG2907 Predicted NAD/FAD-binding protein.
 
   
 0.484
EAQ05299.1
Superoxide dismutase, Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
   0.472
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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