STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05869.1Cobalt chelatase, pCobT subunit; COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase). (663 aa)    
Predicted Functional Partners:
EAQ05867.1
Cobalt chelatase, CobS subunit; COG0714 MoxR-like ATPases.
 
 
 0.986
cobB
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
     
  0.922
EAQ08066.1
cobN protein; COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.
     
 0.795
EAQ07563.1
Magnesium-chelatase subunit H; COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.
     
 0.795
EAQ05866.1
DnaJ domain protein; COG2214 DnaJ-class molecular chaperone.
 
     0.734
EAQ06464.1
COG2927 DNA polymerase III, chi subunit.
  
     0.691
EAQ07951.1
Hypothetical protein.
  
     0.686
EAQ05870.1
COG0006 Xaa-Pro aminopeptidase.
 
     0.668
EAQ05871.1
COG2343 Uncharacterized protein conserved in bacteria.
       0.668
atpF
ATP synthase F0, B' subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.666
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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