STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05917.1Hypothetical protein. (761 aa)    
Predicted Functional Partners:
EAQ05296.1
Possible peptidoglycan binding protein; COG1652 Uncharacterized protein containing LysM domain.
  
 
   0.816
EAQ07454.1
Hypothetical protein.
  
     0.733
EAQ06211.1
Hypothetical protein.
  
     0.730
EAQ06707.1
Lipoprotein, putative.
  
     0.719
EAQ07919.1
Hypothetical protein.
  
     0.701
EAQ07030.1
Hypothetical protein.
  
     0.699
EAQ06810.1
Rhomboid family protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
  
     0.683
EAQ05929.1
Lipoprotein, putative; COG0419 ATPase involved in DNA repair.
  
     0.654
EAQ06919.1
Hypothetical protein.
  
     0.636
EAQ06970.1
Hypothetical protein; COG1455 Phosphotransferase system cellobiose-specific component IIC.
  
     0.635
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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