STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05920.1Hypothetical protein. (242 aa)    
Predicted Functional Partners:
EAQ05921.1
Iron-sulfur cluster-binding protein; COG0633 Ferredoxin.
       0.814
EAQ05922.1
COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family.
       0.489
EAQ06776.1
Hypothetical protein.
  
     0.448
EAQ07321.1
Hypothetical protein.
  
     0.441
EAQ05872.1
COG0038 Chloride channel protein EriC.
  
     0.439
EAQ07827.1
SlyX protein, putative; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
     0.439
EAQ06541.1
Hypothetical protein.
  
     0.424
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.