Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ05922.1 | EAQ05923.1 | SKA53_07451 | SKA53_07456 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | HflC protein; HflC and HflK could regulate a protease. | 0.720 |
| EAQ05922.1 | EAQ05924.1 | SKA53_07451 | SKA53_07461 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | HflK protein; HflC and HflK could encode or regulate a protease. | 0.708 |
| EAQ05922.1 | EAQ05959.1 | SKA53_07451 | SKA53_07636 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Hypothetical protein. | 0.735 |
| EAQ05922.1 | EAQ06229.1 | SKA53_07451 | SKA53_04058 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Membrane-associated zinc metalloprotease, putative; COG0750 Predicted membrane-associated Zn-dependent proteases 1. | 0.714 |
| EAQ05922.1 | EAQ06780.1 | SKA53_07451 | SKA53_14571 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | MaoC family protein; COG2030 Acyl dehydratase. | 0.722 |
| EAQ05922.1 | EAQ07734.1 | SKA53_07451 | SKA53_12893 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | MaoC family protein; COG2030 Acyl dehydratase. | 0.722 |
| EAQ05922.1 | EAQ07865.1 | SKA53_07451 | SKA53_09084 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Hypothetical protein; COG2319 FOG: WD40 repeat. | 0.779 |
| EAQ05922.1 | alaS | SKA53_07451 | SKA53_03344 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.734 |
| EAQ05922.1 | glpK | SKA53_07451 | SKA53_08181 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.850 |
| EAQ05922.1 | lon | SKA53_07451 | SKA53_02726 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Probable ATP-dependent protease La protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.789 |
| EAQ05923.1 | EAQ05922.1 | SKA53_07456 | SKA53_07451 | HflC protein; HflC and HflK could regulate a protease. | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | 0.720 |
| EAQ05923.1 | EAQ05924.1 | SKA53_07456 | SKA53_07461 | HflC protein; HflC and HflK could regulate a protease. | HflK protein; HflC and HflK could encode or regulate a protease. | 0.999 |
| EAQ05924.1 | EAQ05922.1 | SKA53_07461 | SKA53_07451 | HflK protein; HflC and HflK could encode or regulate a protease. | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | 0.708 |
| EAQ05924.1 | EAQ05923.1 | SKA53_07461 | SKA53_07456 | HflK protein; HflC and HflK could encode or regulate a protease. | HflC protein; HflC and HflK could regulate a protease. | 0.999 |
| EAQ05959.1 | EAQ05922.1 | SKA53_07636 | SKA53_07451 | Hypothetical protein. | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | 0.735 |
| EAQ05959.1 | EAQ07865.1 | SKA53_07636 | SKA53_09084 | Hypothetical protein. | Hypothetical protein; COG2319 FOG: WD40 repeat. | 0.995 |
| EAQ05959.1 | alaS | SKA53_07636 | SKA53_03344 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.993 |
| EAQ05959.1 | glpK | SKA53_07636 | SKA53_08181 | Hypothetical protein. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.830 |
| EAQ06229.1 | EAQ05922.1 | SKA53_04058 | SKA53_07451 | Membrane-associated zinc metalloprotease, putative; COG0750 Predicted membrane-associated Zn-dependent proteases 1. | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | 0.714 |
| EAQ06780.1 | EAQ05922.1 | SKA53_14571 | SKA53_07451 | MaoC family protein; COG2030 Acyl dehydratase. | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | 0.722 |
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