Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ05570.1 | EAQ05923.1 | SKA53_00749 | SKA53_07456 | COG2268 Uncharacterized protein conserved in bacteria. | HflC protein; HflC and HflK could regulate a protease. | 0.655 |
| EAQ05570.1 | EAQ05924.1 | SKA53_00749 | SKA53_07461 | COG2268 Uncharacterized protein conserved in bacteria. | HflK protein; HflC and HflK could encode or regulate a protease. | 0.655 |
| EAQ05922.1 | EAQ05923.1 | SKA53_07451 | SKA53_07456 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | HflC protein; HflC and HflK could regulate a protease. | 0.720 |
| EAQ05922.1 | EAQ05924.1 | SKA53_07451 | SKA53_07461 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | HflK protein; HflC and HflK could encode or regulate a protease. | 0.708 |
| EAQ05922.1 | EAQ05925.1 | SKA53_07451 | SKA53_07466 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Glutathione-disulfide reductase; COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes. | 0.458 |
| EAQ05922.1 | EAQ06934.1 | SKA53_07451 | SKA53_15341 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Rhomboid family protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | 0.471 |
| EAQ05922.1 | ftsH | SKA53_07451 | SKA53_08551 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.541 |
| EAQ05922.1 | rpiA | SKA53_07451 | SKA53_07471 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.418 |
| EAQ05923.1 | EAQ05570.1 | SKA53_07456 | SKA53_00749 | HflC protein; HflC and HflK could regulate a protease. | COG2268 Uncharacterized protein conserved in bacteria. | 0.655 |
| EAQ05923.1 | EAQ05922.1 | SKA53_07456 | SKA53_07451 | HflC protein; HflC and HflK could regulate a protease. | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | 0.720 |
| EAQ05923.1 | EAQ05924.1 | SKA53_07456 | SKA53_07461 | HflC protein; HflC and HflK could regulate a protease. | HflK protein; HflC and HflK could encode or regulate a protease. | 0.999 |
| EAQ05923.1 | EAQ05925.1 | SKA53_07456 | SKA53_07466 | HflC protein; HflC and HflK could regulate a protease. | Glutathione-disulfide reductase; COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes. | 0.750 |
| EAQ05923.1 | EAQ06810.1 | SKA53_07456 | SKA53_14721 | HflC protein; HflC and HflK could regulate a protease. | Rhomboid family protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | 0.729 |
| EAQ05923.1 | EAQ06934.1 | SKA53_07456 | SKA53_15341 | HflC protein; HflC and HflK could regulate a protease. | Rhomboid family protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | 0.729 |
| EAQ05923.1 | engB | SKA53_07456 | SKA53_13531 | HflC protein; HflC and HflK could regulate a protease. | GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. | 0.527 |
| EAQ05923.1 | ftsH | SKA53_07456 | SKA53_08551 | HflC protein; HflC and HflK could regulate a protease. | ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.992 |
| EAQ05923.1 | hflX | SKA53_07456 | SKA53_04838 | HflC protein; HflC and HflK could regulate a protease. | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.607 |
| EAQ05923.1 | rpiA | SKA53_07456 | SKA53_07471 | HflC protein; HflC and HflK could regulate a protease. | Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.684 |
| EAQ05924.1 | EAQ05570.1 | SKA53_07461 | SKA53_00749 | HflK protein; HflC and HflK could encode or regulate a protease. | COG2268 Uncharacterized protein conserved in bacteria. | 0.655 |
| EAQ05924.1 | EAQ05922.1 | SKA53_07461 | SKA53_07451 | HflK protein; HflC and HflK could encode or regulate a protease. | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | 0.708 |
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