Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ05570.1 | EAQ05923.1 | SKA53_00749 | SKA53_07456 | COG2268 Uncharacterized protein conserved in bacteria. | HflC protein; HflC and HflK could regulate a protease. | 0.655 |
| EAQ05570.1 | EAQ05924.1 | SKA53_00749 | SKA53_07461 | COG2268 Uncharacterized protein conserved in bacteria. | HflK protein; HflC and HflK could encode or regulate a protease. | 0.655 |
| EAQ05922.1 | EAQ05923.1 | SKA53_07451 | SKA53_07456 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | HflC protein; HflC and HflK could regulate a protease. | 0.720 |
| EAQ05922.1 | EAQ05924.1 | SKA53_07451 | SKA53_07461 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | HflK protein; HflC and HflK could encode or regulate a protease. | 0.708 |
| EAQ05922.1 | EAQ05925.1 | SKA53_07451 | SKA53_07466 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Glutathione-disulfide reductase; COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes. | 0.458 |
| EAQ05922.1 | EAQ06934.1 | SKA53_07451 | SKA53_15341 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Rhomboid family protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | 0.471 |
| EAQ05922.1 | ftsH | SKA53_07451 | SKA53_08551 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.541 |
| EAQ05922.1 | rpiA | SKA53_07451 | SKA53_07471 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.418 |
| EAQ05922.1 | yidC | SKA53_07451 | SKA53_13536 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Putative inner membrane protein translocase component YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.536 |
| EAQ05923.1 | EAQ05570.1 | SKA53_07456 | SKA53_00749 | HflC protein; HflC and HflK could regulate a protease. | COG2268 Uncharacterized protein conserved in bacteria. | 0.655 |
| EAQ05923.1 | EAQ05922.1 | SKA53_07456 | SKA53_07451 | HflC protein; HflC and HflK could regulate a protease. | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | 0.720 |
| EAQ05923.1 | EAQ05924.1 | SKA53_07456 | SKA53_07461 | HflC protein; HflC and HflK could regulate a protease. | HflK protein; HflC and HflK could encode or regulate a protease. | 0.999 |
| EAQ05923.1 | EAQ05925.1 | SKA53_07456 | SKA53_07466 | HflC protein; HflC and HflK could regulate a protease. | Glutathione-disulfide reductase; COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes. | 0.750 |
| EAQ05923.1 | EAQ06810.1 | SKA53_07456 | SKA53_14721 | HflC protein; HflC and HflK could regulate a protease. | Rhomboid family protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | 0.729 |
| EAQ05923.1 | EAQ06934.1 | SKA53_07456 | SKA53_15341 | HflC protein; HflC and HflK could regulate a protease. | Rhomboid family protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). | 0.729 |
| EAQ05923.1 | ftsH | SKA53_07456 | SKA53_08551 | HflC protein; HflC and HflK could regulate a protease. | ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.992 |
| EAQ05923.1 | hflX | SKA53_07456 | SKA53_04838 | HflC protein; HflC and HflK could regulate a protease. | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.607 |
| EAQ05923.1 | rpiA | SKA53_07456 | SKA53_07471 | HflC protein; HflC and HflK could regulate a protease. | Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.684 |
| EAQ05923.1 | yidC | SKA53_07456 | SKA53_13536 | HflC protein; HflC and HflK could regulate a protease. | Putative inner membrane protein translocase component YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.522 |
| EAQ05924.1 | EAQ05570.1 | SKA53_07461 | SKA53_00749 | HflK protein; HflC and HflK could encode or regulate a protease. | COG2268 Uncharacterized protein conserved in bacteria. | 0.655 |
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