STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05929.1Lipoprotein, putative; COG0419 ATPase involved in DNA repair. (463 aa)    
Predicted Functional Partners:
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
   
 
  0.850
EAQ07108.1
Hypothetical protein.
  
    0.773
EAQ05749.1
Lipoprotein, putative; COG0797 Lipoproteins.
 
     0.773
EAQ07109.1
Hypothetical protein.
  
    0.763
EAQ06517.1
COG0840 Methyl-accepting chemotaxis protein.
  
 
  0.752
EAQ06858.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
 
  0.752
EAQ06919.1
Hypothetical protein.
  
     0.739
EAQ05309.1
Hypothetical protein; COG0008 Glutamyl- and glutaminyl-tRNA synthetases.
 
  
  0.729
EAQ07791.1
Hypothetical protein.
  
    0.721
EAQ07087.1
Hypothetical protein.
  
 
  0.713
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.