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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05936.1COG4103 Uncharacterized protein conserved in bacteria. (145 aa)    
Predicted Functional Partners:
EAQ05937.1
Hypothetical protein; COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
       0.831
rlmJ
Hypothetical protein; Specifically methylates the adenine in position 2030 of 23S rRNA.
       0.725
EAQ05934.1
COG3713 Outer membrane protein V.
       0.507
EAQ05938.1
ABC basic amino acid transporter, ATPase subunit; COG4598 ABC-type histidine transport system, ATPase component.
       0.490
EAQ05939.1
ABC basic amino acid transporter, solute-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
       0.470
EAQ06667.1
Hypothetical protein.
  
     0.470
EAQ07291.1
Hypothetical protein.
  
     0.426
EAQ05940.1
ABC transporter, permease protein, HisMQ family; COG4215 ABC-type arginine transport system, permease component.
       0.419
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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