STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05939.1ABC basic amino acid transporter, solute-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (240 aa)    
Predicted Functional Partners:
EAQ05941.1
His/Glu/Gln/Arg/opine family ABC transporter, permease protein; COG4160 ABC-type arginine/histidine transport system, permease component.
 
 
 0.991
EAQ05938.1
ABC basic amino acid transporter, ATPase subunit; COG4598 ABC-type histidine transport system, ATPase component.
 
  0.977
EAQ07705.1
Putative glutamine ABC transporter permease protein; COG0765 ABC-type amino acid transport system, permease component.
 
 0.962
EAQ06567.1
ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC; COG0765 ABC-type amino acid transport system, permease component.
 
 0.961
EAQ05940.1
ABC transporter, permease protein, HisMQ family; COG4215 ABC-type arginine transport system, permease component.
 
  0.942
EAQ06568.1
Glutamate/glutamine/aspartate/asparagine ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
  0.916
EAQ07704.1
Putative ABC transporter ATP-binding protein - glutamine transport; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
  0.915
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
   
 0.882
EAQ05611.1
Polar amino acid uptake family ABC transporter, permease protein; COG4215 ABC-type arginine transport system, permease component.
 
  0.873
EAQ06566.1
ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztB; COG4597 ABC-type amino acid transport system, permease component.
 
 
 0.812
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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