STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05947.1Phasin, PhaP. (148 aa)    
Predicted Functional Partners:
EAQ05946.1
Polyhydroxyalkanoate synthesis repressor PhaR; COG5394 Uncharacterized protein conserved in bacteria.
 
   
 0.907
EAQ05949.1
Polyhydroxyalkanoate depolymerase, intracellular; COG4553 Poly-beta-hydroxyalkanoate depolymerase.
 
   
 0.869
EAQ05948.1
Poly-beta-hydroxybutyrate polymerase; COG3243 Poly(3-hydroxyalkanoate) synthetase.
 
   
 0.859
EAQ06449.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
  
     0.772
EAQ06707.1
Lipoprotein, putative.
  
     0.760
EAQ07320.1
Hypothetical protein; COG3926 putative secretion activating protein.
  
     0.755
EAQ06715.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.747
EAQ05930.1
Hypothetical protein.
  
     0.744
EAQ07321.1
Hypothetical protein.
  
     0.743
EAQ06348.1
Hypothetical protein; COG1079 Uncharacterized ABC-type transport system, permease component.
  
     0.738
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.