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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05948.1Poly-beta-hydroxybutyrate polymerase; COG3243 Poly(3-hydroxyalkanoate) synthetase. (600 aa)    
Predicted Functional Partners:
EAQ05949.1
Polyhydroxyalkanoate depolymerase, intracellular; COG4553 Poly-beta-hydroxyalkanoate depolymerase.
 
  
 0.992
EAQ07734.1
MaoC family protein; COG2030 Acyl dehydratase.
 
  
 0.931
EAQ07916.1
enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /3-hydroxybutyryl-CoA epimerase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
     
 0.909
EAQ05946.1
Polyhydroxyalkanoate synthesis repressor PhaR; COG5394 Uncharacterized protein conserved in bacteria.
 
   
 0.904
EAQ05947.1
Phasin, PhaP.
 
   
 0.859
EAQ06618.1
Beta-ketothiolase, acetoacetyl-CoA reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 0.815
EAQ06354.1
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 0.741
EAQ06355.1
Phospholipase, patatin-like family; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
 
   
 0.649
EAQ05692.1
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
   
 
 0.619
EAQ05414.1
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
   
 
 0.555
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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