Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06005.1COG3210 Large exoproteins involved in heme utilization or adhesion. (1211 aa)    
Predicted Functional Partners:
EAQ05362.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
  0.830
EAQ07760.1
FtsK/SpoIIIE family protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
    
 
 0.753
EAQ05716.1
Putative Hemin receptor protein HmuR; COG1629 Outer membrane receptor proteins, mostly Fe transport.
    
 
 0.742
EAQ05347.1
Type I secretion membrane fusion protein, HlyD; COG0845 Membrane-fusion protein.
 
  
 0.730
EAQ06737.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
    
 0.699
EAQ06652.1
COG4618 ABC-type protease/lipase transport system, ATPase and permease components.
 
   
 0.685
EAQ06651.1
Type I secretion membrane fusion protein, HlyD family; COG0845 Membrane-fusion protein.
 
  
 0.678
EAQ08175.1
COG1360 Flagellar motor protein.
   
 0.677
EAQ06258.1
VCBS; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
0.660
EAQ07669.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
0.655
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.