STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06012.1COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family. (343 aa)    
Predicted Functional Partners:
EAQ06011.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  0.997
EAQ06010.1
COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.980
EAQ06013.1
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
  0.978
EAQ06379.1
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
 0.923
EAQ06383.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.921
EAQ05575.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  0.879
EAQ06008.1
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 
  0.871
EAQ06380.1
COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.870
EAQ08134.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.857
EAQ06381.1
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 
  0.836
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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