Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ06016.1Class I diheme cytochrome c4; COG2863 Cytochrome c553. (110 aa)    
Predicted Functional Partners:
EAQ06179.1
COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
 
 0.962
EAQ06180.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
 0.958
EAQ07865.1
Hypothetical protein; COG2319 FOG: WD40 repeat.
   
 0.933
EAQ05538.1
Oxidoreductase, molybdopterin-binding; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 0.912
EAQ07592.1
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.907
EAQ06017.1
COG2133 Glucose/sorbosone dehydrogenases.
 
  
  0.903
EAQ06177.1
Cbb3-type cytochrome c oxidase CcoP subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 0.896
EAQ07590.1
COG2857 Cytochrome c1.
  
 0.882
EAQ07078.1
Hypothetical protein; COG2010 Cytochrome c, mono- and diheme variants.
  
 0.875
EAQ05536.1
Iron-sulfur cluster-binding protein; COG0437 Fe-S-cluster-containing hydrogenase components 1.
   
  0.834
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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