STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06019.1Membrane protein, putative; COG3748 Predicted membrane protein. (388 aa)    
Predicted Functional Partners:
EAQ08030.1
Polysaccharide deacetylase family protein; COG0726 Predicted xylanase/chitin deacetylase.
 
    0.841
EAQ06022.1
Polysaccharide deacetylase family protein; COG0726 Predicted xylanase/chitin deacetylase.
 
    0.840
EAQ06023.1
COG3194 Ureidoglycolate hydrolase.
 
    0.768
EAQ06021.1
COG2351 Transthyretin-like protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
 0.756
EAQ08029.1
COG3194 Ureidoglycolate hydrolase.
 
    0.746
EAQ06070.1
COG2351 Transthyretin-like protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
 0.735
EAQ07832.1
Xanthine dehydrogenase chaperone/MPT insertion protein; COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
    0.635
EAQ05332.1
Putative polysaccharide deacetylase; COG0726 Predicted xylanase/chitin deacetylase.
 
    0.611
EAQ07831.1
COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B.
 
     0.590
EAQ07830.1
COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A.
 
     0.557
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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