STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06033.1COG1024 Enoyl-CoA hydratase/carnithine racemase. (269 aa)    
Predicted Functional Partners:
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
   
 0.985
EAQ08009.1
COG0642 Signal transduction histidine kinase.
   
 0.962
EAQ06032.1
Probable AMP-binding protein; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
  0.899
EAQ07325.1
enoyl-CoA hydratase/isomerase family protein; COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
0.809
EAQ06034.1
OsmC/Ohr family protein; COG1764 Predicted redox protein, regulator of disulfide bond formation.
 
     0.786
EAQ07790.1
COG1250 3-hydroxyacyl-CoA dehydrogenase.
 0.786
lcdH
3-hydroxybutyryl-CoA dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
  
 0.756
rpsI
COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
   0.701
rpsP
COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
    
   0.698
rpmG
COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
    
 
 0.692
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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