Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAQ06034.1OsmC/Ohr family protein; COG1764 Predicted redox protein, regulator of disulfide bond formation. (133 aa)    
Predicted Functional Partners:
EAQ06035.1
COG0404 Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
 
     0.825
EAQ06033.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
     0.785
EAQ06032.1
Probable AMP-binding protein; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
       0.757
EAQ05687.1
COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family.
  
  
 0.749
EAQ06036.1
COG1522 Transcriptional regulators.
 
     0.669
EAQ05345.1
COG1538 Outer membrane protein.
  
     0.617
EAQ06485.1
Lipoprotein, SmpA/OmlA family; COG2913 Small protein A (tmRNA-binding).
   
  
 0.543
EAQ06015.1
COG0386 Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
  
 0.510
EAQ05701.1
Hypothetical protein.
  
     0.507
EAQ05296.1
Possible peptidoglycan binding protein; COG1652 Uncharacterized protein containing LysM domain.
   
    0.498
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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