Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ06050.1Hypothetical protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component. (182 aa)    
Predicted Functional Partners:
EAQ06049.1
Hypothetical protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
  0.996
EAQ06048.1
Putative decarboxylase.
 
  0.968
EAQ06051.1
Hypothetical protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
    0.916
EAQ06047.1
malonyl-CoA synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
     0.807
EAQ06052.1
Regulatory protein GntR, HTH:GntR, C-terminal; COG1802 Transcriptional regulators.
 
     0.771
EAQ06044.1
Alkyl hydroperoxide reductase/thiol-specific antioxidant; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
       0.737
EAQ06045.1
Hypothetical protein.
       0.737
EAQ06046.1
Quinone oxidoreductase, putative; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
       0.737
EAQ05813.1
Hypothetical protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
     
  0.699
EAQ06577.1
TRAP-T family transporter, small (4 TMs) inner membrane subunit; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
     
  0.698
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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