Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ06059.1Fumarylacetoacetate (FAA) hydrolase family protein; COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). (285 aa)    
Predicted Functional Partners:
EAQ06025.1
COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization.
     
  0.761
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.745
EAQ06892.1
Glycolate oxidase, iron-sulfur subunit; COG0247 Fe-S oxidoreductase.
    
  0.734
EAQ07857.1
D-isomer specific 2-hydroxyacid dehydrogenase family protein; COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases.
    
  0.730
EAQ06893.1
Glycolate oxidase, GlcE subunit; COG0277 FAD/FMN-containing dehydrogenases.
    
  0.729
EAQ06516.1
2-dehydro-3-deoxyphosphogluconate; COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
     
  0.727
EAQ08027.1
Threonine aldolase, low-specificity; COG3616 Predicted amino acid aldolase or racemase.
     
  0.727
ureA
COG0831 Urea amidohydrolase (urease) gamma subunit; Belongs to the urease gamma subunit family.
     
  0.727
ureB
Urease, beta subunit; COG0832 Urea amidohydrolase (urease) beta subunit; Belongs to the urease beta subunit family.
     
  0.727
ureC
Urease, alpha subunit; COG0804 Urea amidohydrolase (urease) alpha subunit.
     
  0.727
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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