STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06067.1COG3839 ABC-type sugar transport systems, ATPase components. (87 aa)    
Predicted Functional Partners:
EAQ07378.1
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
 0.913
EAQ05207.1
ABC alpha-glucoside transporter, inner membrane subunit AglG; COG0395 ABC-type sugar transport system, permease component.
  
 0.907
EAQ05416.1
COG0395 ABC-type sugar transport system, permease component.
  
 0.898
EAQ05531.1
ABC transporter, substrate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
  
 0.883
EAQ05205.1
ABC alpha-glucoside transporter, perplasmic substrate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
  
 0.883
EAQ07375.1
Periplasmic sorbitol-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
  
 0.883
EAQ05417.1
COG1175 ABC-type sugar transport systems, permease components.
  
 0.846
EAQ05206.1
ABC alpha-glucoside transporter, inner membrane subunit AglF; COG1175 ABC-type sugar transport systems, permease components.
  
 0.846
EAQ07377.1
COG1175 ABC-type sugar transport systems, permease components.
  
 0.846
EAQ06069.1
COG1454 Alcohol dehydrogenase, class IV.
 
    0.764
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.