STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06107.1Oxidoreductase, FAD-binding; COG0277 FAD/FMN-containing dehydrogenases. (470 aa)    
Predicted Functional Partners:
EAQ08212.1
Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1.
    
 0.851
EAQ07148.1
Formate dehydrogenase, beta subunit; COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
   
   0.844
EAQ07926.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
  
 
 0.831
EAQ07520.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
  
 
 0.831
EAQ06892.1
Glycolate oxidase, iron-sulfur subunit; COG0247 Fe-S oxidoreductase.
 
 0.822
EAQ06110.1
COG0498 Threonine synthase.
  
 
 0.821
EAQ05231.1
Dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.819
EAQ06893.1
Glycolate oxidase, GlcE subunit; COG0277 FAD/FMN-containing dehydrogenases.
  
 
0.810
EAQ06109.1
Peptidase, M16 family; COG0612 Predicted Zn-dependent peptidases; Belongs to the peptidase M16 family.
    
  0.799
EAQ06108.1
Putative ribosomal-protein-alanine acetyltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
       0.788
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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