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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06123.1Transglycosylase, Slt family; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). (279 aa)    
Predicted Functional Partners:
EAQ06124.1
Hypothetical protein; COG3288 NAD/NADP transhydrogenase alpha subunit.
 
    0.701
EAQ07426.1
FliI, Flagellum-specific ATPase; COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
 
  
 0.609
EAQ06133.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.550
fliE
COG1677 Flagellar hook-basal body protein.
  
  
 0.538
EAQ06130.1
Type II/IV secretion system protein, TadA subfamily; COG4962 Flp pilus assembly protein, ATPase CpaF.
 
    0.526
EAQ06134.1
Lipoprotein, putative; COG0457 FOG: TPR repeat.
 
     0.506
EAQ08004.1
Hypothetical protein.
  
    0.502
EAQ07452.1
Possible flagellar hook-associated protein 2 (filament cap protein); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
    0.502
EAQ06135.1
Hypothetical protein.
 
     0.489
EAQ07429.1
Flagellar FliF M-ring protein; COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein.
  
    0.481
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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