STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolBTranslocation protein TolB precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (438 aa)    
Predicted Functional Partners:
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 0.981
EAQ06144.1
COG1729 Uncharacterized protein conserved in bacteria.
  
  
 0.968
tolQ
Proton transporter TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
  
 0.964
EAQ06148.1
ExbD/TolR family protein; COG0848 Biopolymer transport protein.
 
  
 0.932
EAQ06147.1
tonB domain protein, putative.
  
 
 0.904
EAQ05827.1
Methylamine utilization protein MauG, putative; COG1858 Cytochrome c peroxidase.
  
   0.863
EAQ08005.1
COG3544 Uncharacterized protein conserved in bacteria.
   
 
 0.862
EAQ06128.1
OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
 
 0.852
EAQ06737.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
 
 0.826
EAQ06629.1
OmpA/MotB family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 0.783
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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