STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06163.1Hypothetical protein. (51 aa)    
Predicted Functional Partners:
EAQ06160.1
Iron-sulfur-binding protein, RdxA/RdxB/FixG family; COG0348 Polyferredoxin.
 
  
 0.978
EAQ06161.1
fixH protein, putative.
 
  
 0.970
EAQ06162.1
Copper-translocating P-type ATPase; COG2217 Cation transport ATPase.
 
  
 0.958
EAQ06179.1
COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
 
 
 0.919
EAQ06177.1
Cbb3-type cytochrome c oxidase CcoP subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 
 0.914
EAQ06180.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.912
EAQ06178.1
Cytochrome c oxidase, cbb3-type, subunit IV.
  
 
 0.692
EAQ07890.1
Copper-translocating P-type ATPase; COG2217 Cation transport ATPase.
  
  
 0.601
EAQ07287.1
Hypothetical protein.
 
     0.504
EAQ06159.1
Membrane protein, putative; COG0477 Permeases of the major facilitator superfamily.
       0.479
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.