STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06166.1COG3210 Large exoproteins involved in heme utilization or adhesion. (465 aa)    
Predicted Functional Partners:
EAQ07760.1
FtsK/SpoIIIE family protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
    
 
 0.878
EAQ05716.1
Putative Hemin receptor protein HmuR; COG1629 Outer membrane receptor proteins, mostly Fe transport.
    
 
 0.857
EAQ06838.1
Hypothetical protein.
 
 0.828
EAQ07471.1
core-2/I-branching enzyme family protein.
  
     0.769
EAQ07472.1
Hypothetical protein.
  
    0.752
EAQ07473.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
    0.738
EAQ07470.1
Hypothetical protein.
  
     0.737
EAQ05437.1
Hypothetical protein.
  
     0.715
EAQ07087.1
Hypothetical protein.
  
  0.709
EAQ05641.1
Glycosyltransferase, group 2 family protein; COG0793 Periplasmic protease.
  
  
  0.703
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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